GDSFMT DOWNLOAD

You should contact the package authors for that. It is also allowed to read a GDS file in parallel with multiple R processes supported by the parallel package. Post questions about Bioconductor to one of the following locations:. The CoreArray project is to develop portable, scalable, bioinformatic data visualization and storage technologies. To support efficient data management in parallel for numerical genomic data, we developed the Genomic Data Structure GDS file format. Description Details Author s References Examples.

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Gogarten, Cathy Laurie, Bruce S. Support site - for questions about Bioconductor packages Bioc-devel mailing list - for package developers.

gdsfmt: R Interface to CoreArray Genomic Data Structure (GDS) files

Post questions about Bioconductor to one of the following locations: Description Details Author s References Examples. Data compression and decompression are available with relatively efficient random access. What can we improve? R Package Documentation rdrr.

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CRAN - Package gdsfmt

Xiuwen Zheng [aut, cre], Stephanie Gogarten [ctb], Jean-loup Gailly and Mark Adler [ctb] for the included zlib sourcesYann Collet [ctb] for the included LZ4 sourcesxz contributors for the included liblzma sources. Home Install Help Developers About. The CoreArray project is to develop portable, scalable, bioinformatic data visualization and storage technologies.

To support efficient data management in parallel for numerical genomic gdsft, we developed the Genomic Data Structure GDS file format. Course and conference gdsfkt.

Post questions about Bioconductor to one of the following locations:. For more information on customizing the embed code, read Embedding Snippets.

Identification and hdsfmt of miRNA sponge interaction networks and modules. We want your feedback! Add the following code to your website. The gdsfmt package offers the efficient operations specifically designed for integers of less than 8 bits, since a diploid genotype, like single-nucleotide polymorphism SNPusually occupies fewer bits than a byte.

Embedding an R snippet on your website. To view documentation for the version of this package installed in your system, start R and enter:. Note that we can't provide technical support on individual packages. This package provides gdsfkt high-level R interface to CoreArray Genomic Data Structure GDS data files, which are portable across platforms and include hierarchical structure to store multiple scalable array-oriented data sets with metadata information.

I can't find what I'm looking for. This package provides a high-level R interface to CoreArray Genomic Data Structure GDS data files, which are portable across platforms with hierarchical structure to store multiple scalable array-oriented data sets with metadata information.

Bioconductor - gdsfmt

It is suited for large-scale datasets, especially for data which are much larger than the available random-access memory. You should contact the package authors for that.

The page or its content looks wrong. Follow Installation instructions to use this package in your R session. Related to gdsfmt-package in gdsfmt For older versions of R, please refer to the appropriate Bioconductor release.

It is also allowed to read a GDS file in parallel with multiple R processes supported by the parallel package. Xiuwen Zheng [aut, cre], Stephanie Gogarten gfsfmt, Jean-loup Gailly and Mark Adler [ctb] for the included zlib sourcesYann Collet [ctb] for the included LZ4 sourcesxz contributors for the included liblzma sources Maintainer: DataImportInfrastructureSoftware.

It is suited for large-scale datasets, especially for data which are much larger than the available random-access memory.